STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900176565_02789Unannotated protein. (246 aa)    
Predicted Functional Partners:
GCA_900176565_03303
Unannotated protein.
    
  0.999
GCA_900176565_02788
Unannotated protein.
 
 
 0.989
GCA_900176565_02353
Unannotated protein.
  
  
 0.937
GCA_900176565_02223
Unannotated protein.
 
 
 0.877
GCA_900176565_02213
Unannotated protein.
     
 0.865
GCA_900176565_02910
Unannotated protein.
 
 
  0.861
GCA_900176565_00634
Unannotated protein.
    
  0.856
GCA_900176565_00272
Unannotated protein.
     
 0.852
GCA_900176565_03673
Unannotated protein.
    
 0.851
GCA_900176565_01316
Unannotated protein.
 
 
  0.850
Your Current Organism:
Thalassobacillus devorans
NCBI taxonomy Id: 279813
Other names: CCM 7282, CECT 7046, DSM 16966, Halobacillus degradans, T. devorans, Thalassobacillus devorans Garcia et al. 2005, strain G-19.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.