node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDA43586.1 | SDA43600.1 | SAMN03080617_00441 | SAMN03080617_00442 | 23S rRNA (cytosine1962-C5)-methyltransferase. | Transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.776 |
SDA43586.1 | SDA43618.1 | SAMN03080617_00441 | SAMN03080617_00443 | 23S rRNA (cytosine1962-C5)-methyltransferase. | ATPase components of ABC transporters with duplicated ATPase domains. | 0.768 |
SDA43600.1 | SDA43586.1 | SAMN03080617_00442 | SAMN03080617_00441 | Transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 23S rRNA (cytosine1962-C5)-methyltransferase. | 0.776 |
SDA43600.1 | SDA43618.1 | SAMN03080617_00442 | SAMN03080617_00443 | Transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | ATPase components of ABC transporters with duplicated ATPase domains. | 0.765 |
SDA43618.1 | SDA43586.1 | SAMN03080617_00443 | SAMN03080617_00441 | ATPase components of ABC transporters with duplicated ATPase domains. | 23S rRNA (cytosine1962-C5)-methyltransferase. | 0.768 |
SDA43618.1 | SDA43600.1 | SAMN03080617_00443 | SAMN03080617_00442 | ATPase components of ABC transporters with duplicated ATPase domains. | Transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.765 |
SDA43618.1 | rplC | SAMN03080617_00443 | SAMN03080617_02919 | ATPase components of ABC transporters with duplicated ATPase domains. | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.762 |
SDA43618.1 | rplD | SAMN03080617_00443 | SAMN03080617_02920 | ATPase components of ABC transporters with duplicated ATPase domains. | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.772 |
SDA43618.1 | rplM | SAMN03080617_00443 | SAMN03080617_01090 | ATPase components of ABC transporters with duplicated ATPase domains. | Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.762 |
SDA43618.1 | rplU | SAMN03080617_00443 | SAMN03080617_03495 | ATPase components of ABC transporters with duplicated ATPase domains. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.763 |
SDA43618.1 | rpmI | SAMN03080617_00443 | SAMN03080617_03307 | ATPase components of ABC transporters with duplicated ATPase domains. | Large subunit ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.782 |
SDA43618.1 | rpsC | SAMN03080617_00443 | SAMN03080617_02925 | ATPase components of ABC transporters with duplicated ATPase domains. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.762 |
SDA43618.1 | rpsM | SAMN03080617_00443 | SAMN03080617_02942 | ATPase components of ABC transporters with duplicated ATPase domains. | Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.777 |
SDA43618.1 | rpsO | SAMN03080617_00443 | SAMN03080617_03250 | ATPase components of ABC transporters with duplicated ATPase domains. | Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.762 |
rplC | SDA43618.1 | SAMN03080617_02919 | SAMN03080617_00443 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | ATPase components of ABC transporters with duplicated ATPase domains. | 0.762 |
rplC | rplD | SAMN03080617_02919 | SAMN03080617_02920 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.999 |
rplC | rplM | SAMN03080617_02919 | SAMN03080617_01090 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplC | rplU | SAMN03080617_02919 | SAMN03080617_03495 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.994 |
rplC | rpmI | SAMN03080617_02919 | SAMN03080617_03307 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Large subunit ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.992 |
rplC | rpsC | SAMN03080617_02919 | SAMN03080617_02925 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.998 |