Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDA38574.1 | SDA67402.1 | SAMN03080617_00177 | SAMN03080617_01655 | Deoxyribodipyrimidine photolyase-related protein. | TIGR03643 family protein. | 0.645 |
SDA38574.1 | SDA67414.1 | SAMN03080617_00177 | SAMN03080617_01656 | Deoxyribodipyrimidine photolyase-related protein. | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | 0.765 |
SDA51026.1 | SDA67402.1 | SAMN03080617_00771 | SAMN03080617_01655 | Beta-carotene 15,15'-monooxygenase, Brp/Blh family; Catalyzes the cleavage of beta-carotene at its central double bond (15,15') to yield two molecules of all-trans-retinal. Belongs to the Brp/Blh beta-carotene diooxygenase family. | TIGR03643 family protein. | 0.407 |
SDA62853.1 | SDA67402.1 | SAMN03080617_01390 | SAMN03080617_01655 | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | TIGR03643 family protein. | 0.573 |
SDA67402.1 | SDA38574.1 | SAMN03080617_01655 | SAMN03080617_00177 | TIGR03643 family protein. | Deoxyribodipyrimidine photolyase-related protein. | 0.645 |
SDA67402.1 | SDA51026.1 | SAMN03080617_01655 | SAMN03080617_00771 | TIGR03643 family protein. | Beta-carotene 15,15'-monooxygenase, Brp/Blh family; Catalyzes the cleavage of beta-carotene at its central double bond (15,15') to yield two molecules of all-trans-retinal. Belongs to the Brp/Blh beta-carotene diooxygenase family. | 0.407 |
SDA67402.1 | SDA62853.1 | SAMN03080617_01655 | SAMN03080617_01390 | TIGR03643 family protein. | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | 0.573 |
SDA67402.1 | SDA67414.1 | SAMN03080617_01655 | SAMN03080617_01656 | TIGR03643 family protein. | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | 0.794 |
SDA67414.1 | SDA38574.1 | SAMN03080617_01656 | SAMN03080617_00177 | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | Deoxyribodipyrimidine photolyase-related protein. | 0.765 |
SDA67414.1 | SDA67402.1 | SAMN03080617_01656 | SAMN03080617_01655 | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | TIGR03643 family protein. | 0.794 |