STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDA74986.1Hypothetical protein. (385 aa)    
Predicted Functional Partners:
SDA56812.1
DNA polymerase-3 subunit gamma/tau.
  
     0.722
SDA92767.1
TonB-dependent Receptor Plug Domain.
  
     0.606
SDA92521.1
Hypothetical protein.
  
     0.598
SDA88692.1
Protein of unknown function.
  
     0.556
SDA56178.1
Protein of unknown function.
  
     0.511
SDA75913.1
Transmembrane family 220, helix.
  
     0.493
SDA93960.1
Hypothetical protein.
  
     0.480
SDA92511.1
Protein of unknown function.
  
     0.478
SDA92508.1
Hypothetical protein.
  
     0.473
SDA59014.1
Hypothetical protein.
  
     0.461
Your Current Organism:
Algoriphagus alkaliphilus
NCBI taxonomy Id: 279824
Other names: A. alkaliphilus, Algoriphagus alkaliphilus (Tiago et al. 2006) Nedashkovskaya et al. 2007 emend. Inan et al. 2015, CIP 108470, Chimaereicella alkaliphila, Chimaereicella alkaliphila Tiago et al. 2006, DSM 22703, LMG 22694, LMG:22694, Sphingobacterium sp. AC74, strain AC-74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.