STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDA77947.1Glycosyltransferase involved in cell wall bisynthesis. (373 aa)    
Predicted Functional Partners:
SDA77935.1
Glycosyltransferase involved in cell wall bisynthesis.
     0.967
SDA77922.1
Hypothetical protein.
 
 
  0.950
SDA77975.1
Hypothetical protein.
 
     0.948
SDA77961.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.945
SDA77998.1
Glycosyl transferase family 2.
 
    0.905
SDA78007.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.803
SDA78020.1
ATP-binding cassette, subfamily B, MsbA.
  
    0.781
SDA77986.1
Transferase hexapeptide (six repeat-containing protein).
  
    0.776
SDA77911.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.764
SDA78032.1
Capsular exopolysaccharide family.
 
  
 0.758
Your Current Organism:
Algoriphagus alkaliphilus
NCBI taxonomy Id: 279824
Other names: A. alkaliphilus, Algoriphagus alkaliphilus (Tiago et al. 2006) Nedashkovskaya et al. 2007 emend. Inan et al. 2015, CIP 108470, Chimaereicella alkaliphila, Chimaereicella alkaliphila Tiago et al. 2006, DSM 22703, LMG 22694, LMG:22694, Sphingobacterium sp. AC74, strain AC-74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.