STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDA91917.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (265 aa)    
Predicted Functional Partners:
SDA81081.1
Amino acid adenylation domain-containing protein.
  
 0.970
SDA92836.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.851
SDA38963.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.825
SDA81067.1
Amino acid adenylation domain-containing protein.
  
 0.783
SDA39272.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.775
SDA79472.1
3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.775
fabZ
3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
  
 0.766
SDA91922.1
Tricorn protease C1 domain-containing protein.
  
    0.744
SDA91927.1
Hypothetical protein.
       0.741
SDA91930.1
Hypothetical protein.
  
    0.738
Your Current Organism:
Algoriphagus alkaliphilus
NCBI taxonomy Id: 279824
Other names: A. alkaliphilus, Algoriphagus alkaliphilus (Tiago et al. 2006) Nedashkovskaya et al. 2007 emend. Inan et al. 2015, CIP 108470, Chimaereicella alkaliphila, Chimaereicella alkaliphila Tiago et al. 2006, DSM 22703, LMG 22694, LMG:22694, Sphingobacterium sp. AC74, strain AC-74
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.