node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDA68633.1 | SDA81081.1 | SAMN03080617_01697 | SAMN03080617_02494 | ATP-dependent helicase HepA. | Amino acid adenylation domain-containing protein. | 0.896 |
SDA68633.1 | SDA94359.1 | SAMN03080617_01697 | SAMN03080617_03898 | ATP-dependent helicase HepA. | Cold shock protein (beta-ribbon, CspA family). | 0.586 |
SDA68633.1 | rplC | SAMN03080617_01697 | SAMN03080617_02919 | ATP-dependent helicase HepA. | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.842 |
SDA68633.1 | rplT | SAMN03080617_01697 | SAMN03080617_03308 | ATP-dependent helicase HepA. | Large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.400 |
SDA68633.1 | rpsG | SAMN03080617_01697 | SAMN03080617_02916 | ATP-dependent helicase HepA. | Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.459 |
SDA68633.1 | rpsL | SAMN03080617_01697 | SAMN03080617_02915 | ATP-dependent helicase HepA. | Small subunit ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.466 |
SDA68633.1 | rpsQ | SAMN03080617_01697 | SAMN03080617_02928 | ATP-dependent helicase HepA. | Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.456 |
SDA81081.1 | SDA68633.1 | SAMN03080617_02494 | SAMN03080617_01697 | Amino acid adenylation domain-containing protein. | ATP-dependent helicase HepA. | 0.896 |
SDA81081.1 | SDA94359.1 | SAMN03080617_02494 | SAMN03080617_03898 | Amino acid adenylation domain-containing protein. | Cold shock protein (beta-ribbon, CspA family). | 0.467 |
SDA81081.1 | rplC | SAMN03080617_02494 | SAMN03080617_02919 | Amino acid adenylation domain-containing protein. | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.997 |
SDA81081.1 | rplS | SAMN03080617_02494 | SAMN03080617_04192 | Amino acid adenylation domain-containing protein. | Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.830 |
SDA81081.1 | rplT | SAMN03080617_02494 | SAMN03080617_03308 | Amino acid adenylation domain-containing protein. | Large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.867 |
SDA81081.1 | rpmA | SAMN03080617_02494 | SAMN03080617_03496 | Amino acid adenylation domain-containing protein. | Large subunit ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.781 |
SDA81081.1 | rpmE2 | SAMN03080617_02494 | SAMN03080617_01429 | Amino acid adenylation domain-containing protein. | Large subunit ribosomal protein L31. | 0.621 |
SDA81081.1 | rpsG | SAMN03080617_02494 | SAMN03080617_02916 | Amino acid adenylation domain-containing protein. | Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.694 |
SDA81081.1 | rpsL | SAMN03080617_02494 | SAMN03080617_02915 | Amino acid adenylation domain-containing protein. | Small subunit ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.814 |
SDA81081.1 | rpsQ | SAMN03080617_02494 | SAMN03080617_02928 | Amino acid adenylation domain-containing protein. | Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.986 |
SDA94359.1 | SDA68633.1 | SAMN03080617_03898 | SAMN03080617_01697 | Cold shock protein (beta-ribbon, CspA family). | ATP-dependent helicase HepA. | 0.586 |
SDA94359.1 | SDA81081.1 | SAMN03080617_03898 | SAMN03080617_02494 | Cold shock protein (beta-ribbon, CspA family). | Amino acid adenylation domain-containing protein. | 0.467 |
SDA94359.1 | rplC | SAMN03080617_03898 | SAMN03080617_02919 | Cold shock protein (beta-ribbon, CspA family). | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.473 |