STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDA95117.1Protein of unknown function. (272 aa)    
Predicted Functional Partners:
SDA95112.1
Hypothetical protein.
 
     0.836
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.792
SDA85947.1
C-terminal domain of CHU protein family protein.
  
     0.770
SDA85953.1
WD40-like Beta Propeller Repeat.
  
     0.769
SDA67565.1
Hypothetical protein.
  
     0.767
SDA89383.1
Hypothetical protein.
  
     0.765
SDA89408.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.764
SDA55284.1
Putative ABC exporter.
  
     0.763
SDA44662.1
Hypothetical protein.
  
     0.755
SDA77668.1
SprB repeat-containing protein.
  
     0.755
Your Current Organism:
Algoriphagus alkaliphilus
NCBI taxonomy Id: 279824
Other names: A. alkaliphilus, Algoriphagus alkaliphilus (Tiago et al. 2006) Nedashkovskaya et al. 2007 emend. Inan et al. 2015, CIP 108470, Chimaereicella alkaliphila, Chimaereicella alkaliphila Tiago et al. 2006, DSM 22703, LMG 22694, LMG:22694, Sphingobacterium sp. AC74, strain AC-74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.