Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG23584.1 | SHG30686.1 | SAMN05443373_10183 | SAMN05443373_101361 | L,D-transpeptidase catalytic domain. | Lipoprotein-anchoring transpeptidase ErfK/SrfK. | 0.479 |
SHG23584.1 | SHH48762.1 | SAMN05443373_10183 | SAMN05443373_11416 | L,D-transpeptidase catalytic domain. | Murein L,D-transpeptidase YcbB/YkuD. | 0.455 |
SHG23584.1 | SHH48789.1 | SAMN05443373_10183 | SAMN05443373_11417 | L,D-transpeptidase catalytic domain. | Murein L,D-transpeptidase YcbB/YkuD. | 0.448 |
SHG30686.1 | SHG23584.1 | SAMN05443373_101361 | SAMN05443373_10183 | Lipoprotein-anchoring transpeptidase ErfK/SrfK. | L,D-transpeptidase catalytic domain. | 0.479 |
SHH48762.1 | SHG23584.1 | SAMN05443373_11416 | SAMN05443373_10183 | Murein L,D-transpeptidase YcbB/YkuD. | L,D-transpeptidase catalytic domain. | 0.455 |
SHH48762.1 | SHH48789.1 | SAMN05443373_11416 | SAMN05443373_11417 | Murein L,D-transpeptidase YcbB/YkuD. | Murein L,D-transpeptidase YcbB/YkuD. | 0.630 |
SHH48789.1 | SHG23584.1 | SAMN05443373_11417 | SAMN05443373_10183 | Murein L,D-transpeptidase YcbB/YkuD. | L,D-transpeptidase catalytic domain. | 0.448 |
SHH48789.1 | SHH48762.1 | SAMN05443373_11417 | SAMN05443373_11416 | Murein L,D-transpeptidase YcbB/YkuD. | Murein L,D-transpeptidase YcbB/YkuD. | 0.630 |