Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG35409.1 | SHG36644.1 | SAMN05443373_101524 | SAMN05443373_101567 | Protein of unknown function. | Signal peptidase I; Belongs to the peptidase S26 family. | 0.444 |
SHG35409.1 | SHG36872.1 | SAMN05443373_101524 | SAMN05443373_101574 | Protein of unknown function. | Tetratricopeptide repeat-containing protein. | 0.709 |
SHG35409.1 | SHG37421.1 | SAMN05443373_101524 | SAMN05443373_101590 | Protein of unknown function. | Hypothetical protein. | 0.698 |
SHG35409.1 | SHG54626.1 | SAMN05443373_101524 | SAMN05443373_102338 | Protein of unknown function. | Transcriptional regulator, TraR/DksA family. | 0.433 |
SHG35409.1 | lspA | SAMN05443373_101524 | SAMN05443373_102339 | Protein of unknown function. | Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.577 |
SHG35409.1 | recO | SAMN05443373_101524 | SAMN05443373_102334 | Protein of unknown function. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.650 |
SHG36644.1 | SHG35409.1 | SAMN05443373_101567 | SAMN05443373_101524 | Signal peptidase I; Belongs to the peptidase S26 family. | Protein of unknown function. | 0.444 |
SHG36644.1 | SHG36872.1 | SAMN05443373_101567 | SAMN05443373_101574 | Signal peptidase I; Belongs to the peptidase S26 family. | Tetratricopeptide repeat-containing protein. | 0.690 |
SHG36644.1 | SHG37421.1 | SAMN05443373_101567 | SAMN05443373_101590 | Signal peptidase I; Belongs to the peptidase S26 family. | Hypothetical protein. | 0.591 |
SHG36644.1 | SHG78516.1 | SAMN05443373_101567 | SAMN05443373_10478 | Signal peptidase I; Belongs to the peptidase S26 family. | Uncharacterized membrane protein YfcA. | 0.490 |
SHG36644.1 | lspA | SAMN05443373_101567 | SAMN05443373_102339 | Signal peptidase I; Belongs to the peptidase S26 family. | Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.570 |
SHG36644.1 | recO | SAMN05443373_101567 | SAMN05443373_102334 | Signal peptidase I; Belongs to the peptidase S26 family. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.468 |
SHG36644.1 | secD | SAMN05443373_101567 | SAMN05443373_101257 | Signal peptidase I; Belongs to the peptidase S26 family. | Protein translocase subunit secF /protein translocase subunit secD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.755 |
SHG36872.1 | SHG35409.1 | SAMN05443373_101574 | SAMN05443373_101524 | Tetratricopeptide repeat-containing protein. | Protein of unknown function. | 0.709 |
SHG36872.1 | SHG36644.1 | SAMN05443373_101574 | SAMN05443373_101567 | Tetratricopeptide repeat-containing protein. | Signal peptidase I; Belongs to the peptidase S26 family. | 0.690 |
SHG36872.1 | SHG37421.1 | SAMN05443373_101574 | SAMN05443373_101590 | Tetratricopeptide repeat-containing protein. | Hypothetical protein. | 0.722 |
SHG36872.1 | SHG54626.1 | SAMN05443373_101574 | SAMN05443373_102338 | Tetratricopeptide repeat-containing protein. | Transcriptional regulator, TraR/DksA family. | 0.610 |
SHG36872.1 | SHG78516.1 | SAMN05443373_101574 | SAMN05443373_10478 | Tetratricopeptide repeat-containing protein. | Uncharacterized membrane protein YfcA. | 0.718 |
SHG36872.1 | lspA | SAMN05443373_101574 | SAMN05443373_102339 | Tetratricopeptide repeat-containing protein. | Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.640 |
SHG36872.1 | recO | SAMN05443373_101574 | SAMN05443373_102334 | Tetratricopeptide repeat-containing protein. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.593 |
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