STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG63867.1His Kinase A (phospho-acceptor) domain-containing protein. (367 aa)    
Predicted Functional Partners:
SHG38237.1
Signal transduction histidine kinase.
  
0.994
SHH24076.1
PAS domain S-box-containing protein.
 
0.992
SHH04198.1
His Kinase A (phospho-acceptor) domain-containing protein.
0.985
SHH45092.1
PAS domain S-box-containing protein.
0.984
SHG26729.1
PAS domain S-box-containing protein.
 
 0.979
SHG63898.1
Two-component system, NtrC family, response regulator HydG.
 
 0.975
SHG44091.1
Signal transduction histidine kinase.
 0.948
SHH07826.1
PAS domain S-box-containing protein.
 
 0.937
SHG48050.1
PAS domain S-box-containing protein.
 0.925
SHG64766.1
PAS domain S-box-containing protein.
 
 0.924
Your Current Organism:
Flavobacterium granuli
NCBI taxonomy Id: 280093
Other names: DSM 19729, F. granuli, Flavobacterium granuli Aslam et al. 2005 emend. Kim et al. 2014, IAM 15099, JCM 21560, KCTC 12201, NBRC 102009, strain Kw05
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