STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG85694.1Hypothetical protein. (601 aa)    
Predicted Functional Partners:
fabZ
3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
  
 
 0.721
SHH33000.1
Hypothetical protein.
 
  
  0.686
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.684
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.671
SHG91477.1
Acyl carrier protein.
  
 0.671
SHH38583.1
Acyl carrier protein.
  
 0.671
SHH33597.1
Dissimilatory nitrite reductase (NO-forming), copper type apoprotein.
  
  
  0.637
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.624
SHG81199.1
[acyl-carrier-protein] S-malonyltransferase.
  
 
 0.608
SHH33630.1
Cytochrome C oxidase, cbb3-type, subunit III.
  
  
  0.564
Your Current Organism:
Flavobacterium granuli
NCBI taxonomy Id: 280093
Other names: DSM 19729, F. granuli, Flavobacterium granuli Aslam et al. 2005 emend. Kim et al. 2014, IAM 15099, JCM 21560, KCTC 12201, NBRC 102009, strain Kw05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.