STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH38426.1Hypothetical protein. (486 aa)    
Predicted Functional Partners:
SHH38391.1
Hypothetical protein.
       0.773
SHH38454.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.773
SHH38489.1
Membrane protein involved in the export of O-antigen and teichoic acid.
       0.773
SHH38360.1
Glycosyl transferases group 1.
       0.768
SHH38521.1
3-oxoacyl-[acyl-carrier protein] reductase.
       0.757
SHH38554.1
AMP-binding enzyme C-terminal domain-containing protein.
       0.757
SHH38583.1
Acyl carrier protein.
       0.757
SHH38613.1
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase.
       0.757
SHH38649.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
       0.757
SHH38681.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
       0.757
Your Current Organism:
Flavobacterium granuli
NCBI taxonomy Id: 280093
Other names: DSM 19729, F. granuli, Flavobacterium granuli Aslam et al. 2005 emend. Kim et al. 2014, IAM 15099, JCM 21560, KCTC 12201, NBRC 102009, strain Kw05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.