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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQ12_02480Phosphonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)    
Predicted Functional Partners:
CQ12_02490
Phosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
phnC
Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 
 0.990
CQ12_02485
Phosphonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.982
CQ12_02445
alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.900
CQ12_02505
Phosphonate metabolism protein PhnM; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.840
CQ12_02460
Carbon-phosphorus lyase complex subunit PhnI; Required for the use of phosphonate and phosphite; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.804
CQ12_02465
Phosphonate C-P lyase system protein PhnH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.794
CQ12_02440
Phosphonate metabolism protein PhnM; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.787
CQ12_01140
Phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.
  
 
 0.778
phnK
Phosphonate C-P lyase system protein PhnK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.778
Your Current Organism:
Bradyrhizobium jicamae
NCBI taxonomy Id: 280332
Other names: B. jicamae, Bradyrhizobium jicamae Ramirez-Bahena et al. 2009, Bradyrhizobium sp. PAC68, Bradyrhizobium sp. PAC683, Bradyrhizobium sp. PAC684, CECT 7395, LMG 24556, LMG:24556, strain PAC68
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