close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQ12_02750Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (524 aa)    
Predicted Functional Partners:
CQ12_41375
TPR_REGION domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.680
CQ12_28900
Addiction module protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.606
CQ12_33915
Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
    
 0.589
CQ12_02745
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.523
CQ12_24995
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.513
CQ12_11565
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
0.448
CQ12_23890
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
0.444
CQ12_15470
Guanylyl cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
0.431
CQ12_32535
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.418
CQ12_40535
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.417
Your Current Organism:
Bradyrhizobium jicamae
NCBI taxonomy Id: 280332
Other names: B. jicamae, Bradyrhizobium jicamae Ramirez-Bahena et al. 2009, Bradyrhizobium sp. PAC68, Bradyrhizobium sp. PAC683, Bradyrhizobium sp. PAC684, CECT 7395, LMG 24556, LMG:24556, strain PAC68
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.