close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQ12_07405Thiosulfate oxidation carrier complex protein SoxZ; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)    
Predicted Functional Partners:
CQ12_07410
With SoxZ catalyzes the oxidation of sulfur compounds; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
CQ12_01540
Thiosulfate oxidation carrier protein SoxY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.989
CQ12_07415
Sulfur oxidation c-type cytochrome SoxX; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.984
CQ12_07400
Sulfur oxidation c-type cytochrome SoxA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.983
CQ12_02345
Quinoprotein dehydrogenase-associated SoxYZ-like carrier; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.976
CQ12_01560
Thiosulfohydrolase SoxB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family.
 
 
 0.967
CQ12_01550
Sulfur oxidation c-type cytochrome SoxA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.927
CQ12_07420
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.919
CQ12_28380
Molybdopterin containing oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.914
CQ12_01545
Thiosulfate oxidation carrier complex protein SoxZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.905
Your Current Organism:
Bradyrhizobium jicamae
NCBI taxonomy Id: 280332
Other names: B. jicamae, Bradyrhizobium jicamae Ramirez-Bahena et al. 2009, Bradyrhizobium sp. PAC68, Bradyrhizobium sp. PAC683, Bradyrhizobium sp. PAC684, CECT 7395, LMG 24556, LMG:24556, strain PAC68
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.