Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CQ12_07690Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)    
Predicted Functional Partners:
CQ12_07685
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.997
CQ12_07680
Bicarbonate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.996
CQ12_17210
Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.987
CQ12_17215
Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.982
CQ12_14600
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.979
CQ12_08370
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.875
CQ12_02135
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.869
CQ12_22895
Nitrate reductase; Periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.866
CQ12_17220
Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.865
CQ12_22900
Nitrate reductase; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
     
  0.865
Your Current Organism:
Bradyrhizobium jicamae
NCBI taxonomy Id: 280332
Other names: B. jicamae, Bradyrhizobium jicamae Ramirez-Bahena et al. 2009, Bradyrhizobium sp. PAC68, Bradyrhizobium sp. PAC683, Bradyrhizobium sp. PAC684, CECT 7395, LMG 24556, LMG:24556, strain PAC68
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