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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQ12_08620Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)    
Predicted Functional Partners:
CQ12_08615
Tryptophan tryptophylquinone biosynthesis enzyme MauG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.684
CQ12_08625
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.675
CQ12_07000
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the multicopper oxidase family.
   
 0.659
CQ12_25555
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.659
CQ12_03420
Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.514
CQ12_26885
Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.498
CQ12_12000
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.489
CQ12_25725
NADH-quinone oxidoreductase chain 13; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.489
CQ12_33385
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.448
CQ12_07075
Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.
    
 0.445
Your Current Organism:
Bradyrhizobium jicamae
NCBI taxonomy Id: 280332
Other names: B. jicamae, Bradyrhizobium jicamae Ramirez-Bahena et al. 2009, Bradyrhizobium sp. PAC68, Bradyrhizobium sp. PAC683, Bradyrhizobium sp. PAC684, CECT 7395, LMG 24556, LMG:24556, strain PAC68
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