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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQ12_10885Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)    
Predicted Functional Partners:
CQ12_10880
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.686
CQ12_10905
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.640
CQ12_02510
Phosphonate metabolism protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.548
CQ12_35775
Non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
  
  
 0.548
CQ12_10875
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.484
CQ12_00815
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.474
CQ12_17880
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.474
CQ12_26950
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.474
CQ12_10890
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.404
Your Current Organism:
Bradyrhizobium jicamae
NCBI taxonomy Id: 280332
Other names: B. jicamae, Bradyrhizobium jicamae Ramirez-Bahena et al. 2009, Bradyrhizobium sp. PAC68, Bradyrhizobium sp. PAC683, Bradyrhizobium sp. PAC684, CECT 7395, LMG 24556, LMG:24556, strain PAC68
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