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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQ12_15645Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. (137 aa)    
Predicted Functional Partners:
CQ12_15650
Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
 
  0.769
CQ12_26010
NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.734
CQ12_03330
NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.714
CQ12_14665
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.609
CQ12_23870
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.563
CQ12_19910
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.553
CQ12_21180
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.546
CQ12_15655
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.508
CQ12_00940
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.464
CQ12_17555
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.435
Your Current Organism:
Bradyrhizobium jicamae
NCBI taxonomy Id: 280332
Other names: B. jicamae, Bradyrhizobium jicamae Ramirez-Bahena et al. 2009, Bradyrhizobium sp. PAC68, Bradyrhizobium sp. PAC683, Bradyrhizobium sp. PAC684, CECT 7395, LMG 24556, LMG:24556, strain PAC68
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