STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adc-2Acetoacetate decarboxylase; Catalyzes the conversion of acetoacetate to acetone and carbon dioxide; Belongs to the ADC family. (246 aa)    
Predicted Functional Partners:
CQ12_06925
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.816
CQ12_26375
succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.749
CQ12_29155
acetyl-CoA--acetoacetyl-CoA transferase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.736
CQ12_26380
succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.727
CQ12_33865
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.726
CQ12_29160
Acetate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.713
CQ12_07585
Patatin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.686
CQ12_28725
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.540
CQ12_23705
Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
       0.495
CQ12_23710
Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
       0.495
Your Current Organism:
Bradyrhizobium jicamae
NCBI taxonomy Id: 280332
Other names: B. jicamae, Bradyrhizobium jicamae Ramirez-Bahena et al. 2009, Bradyrhizobium sp. PAC68, Bradyrhizobium sp. PAC683, Bradyrhizobium sp. PAC684, CECT 7395, LMG 24556, LMG:24556, strain PAC68
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