Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OLZ20130.1 | OLZ20134.1 | BFX07_00655 | BFX07_00675 | Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.974 |
| OLZ20130.1 | OLZ20156.1 | BFX07_00655 | BFX07_00810 | Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.963 |
| OLZ20130.1 | OLZ20159.1 | BFX07_00655 | BFX07_00825 | Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar basal body rod protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.936 |
| OLZ20130.1 | OLZ20223.1 | BFX07_00655 | BFX07_01185 | Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.953 |
| OLZ20130.1 | OLZ20224.1 | BFX07_00655 | BFX07_01190 | Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.912 |
| OLZ20130.1 | OLZ20522.1 | BFX07_00655 | BFX07_15000 | Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.680 |
| OLZ20130.1 | csrA | BFX07_00655 | BFX07_00665 | Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.872 |
| OLZ20130.1 | flgK | BFX07_00655 | BFX07_00650 | Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.994 |
| OLZ20130.1 | fliW | BFX07_00655 | BFX07_00660 | Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar biosynthesis protein FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.988 |
| OLZ20134.1 | OLZ20130.1 | BFX07_00675 | BFX07_00655 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.974 |
| OLZ20134.1 | OLZ20156.1 | BFX07_00675 | BFX07_00810 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.997 |
| OLZ20134.1 | OLZ20159.1 | BFX07_00675 | BFX07_00825 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar basal body rod protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.972 |
| OLZ20134.1 | OLZ20223.1 | BFX07_00675 | BFX07_01185 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.949 |
| OLZ20134.1 | OLZ20224.1 | BFX07_00675 | BFX07_01190 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.962 |
| OLZ20134.1 | OLZ20522.1 | BFX07_00675 | BFX07_15000 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.987 |
| OLZ20134.1 | csrA | BFX07_00675 | BFX07_00665 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.707 |
| OLZ20134.1 | flgK | BFX07_00675 | BFX07_00650 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.993 |
| OLZ20134.1 | fliW | BFX07_00675 | BFX07_00660 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar biosynthesis protein FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.925 |
| OLZ20156.1 | OLZ20130.1 | BFX07_00810 | BFX07_00655 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.963 |
| OLZ20156.1 | OLZ20134.1 | BFX07_00810 | BFX07_00675 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
page 1 of 5