Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OLZ19238.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)    
Predicted Functional Partners:
OLZ18902.1
Spore protease YyaC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.840
OLZ18900.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OLZ18901.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OLZ18897.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.728
OLZ18898.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.719
OLZ21829.1
Stage III sporulation protein AE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.711
OLZ21502.1
Stage II sporulation protein M; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.697
OLZ18899.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.693
OLZ18290.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.629
OLZ19252.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.624
Your Current Organism:
Sulfobacillus thermosulfidooxidans
NCBI taxonomy Id: 28034
Other names: DSM 9293, S. thermosulfidooxidans, Sulfobacillus sp. G2, strain AT-1
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