OLZ18119.1 protein (Sulfobacillus thermosulfidooxidans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Sulfobacillus thermosulfidooxidans

NCBI taxonomy Id: 28034
Other names: DSM 9293, S. thermosulfidooxidans, Sulfobacillus sp. G2, strain AT-1

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OLZ18065.1	OLZ18112.1	BFX07_06725	BFX07_06970	CoA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
OLZ18065.1	OLZ18118.1	BFX07_06725	BFX07_07000	CoA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cystathionine gamma-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.896
OLZ18065.1	OLZ18119.1	BFX07_06725	BFX07_07005	CoA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.898
OLZ18065.1	OLZ18385.1	BFX07_06725	BFX07_08585	CoA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.943
OLZ18065.1	OLZ22108.1	BFX07_06725	BFX07_10925	CoA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.753
OLZ18065.1	OLZ22241.1	BFX07_06725	BFX07_10280	CoA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.765
OLZ18112.1	OLZ18065.1	BFX07_06970	BFX07_06725	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	CoA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
OLZ18112.1	OLZ18113.1	BFX07_06970	BFX07_06975	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OLZ18112.1	OLZ18114.1	BFX07_06970	BFX07_06980	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
OLZ18112.1	OLZ18118.1	BFX07_06970	BFX07_07000	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cystathionine gamma-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
OLZ18112.1	OLZ18119.1	BFX07_06970	BFX07_07005	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
OLZ18112.1	OLZ18385.1	BFX07_06970	BFX07_08585	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
OLZ18112.1	OLZ18535.1	BFX07_06970	BFX07_08415	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cysteine synthase A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.	0.853
OLZ18112.1	OLZ21606.1	BFX07_06970	BFX07_12300	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cysteine synthase A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.	0.853
OLZ18112.1	OLZ22108.1	BFX07_06970	BFX07_10925	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.907
OLZ18112.1	OLZ22241.1	BFX07_06970	BFX07_10280	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.982
OLZ18113.1	OLZ18112.1	BFX07_06975	BFX07_06970	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OLZ18113.1	OLZ18114.1	BFX07_06975	BFX07_06980	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.929
OLZ18113.1	OLZ18118.1	BFX07_06975	BFX07_07000	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cystathionine gamma-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.830
OLZ18113.1	OLZ18119.1	BFX07_06975	BFX07_07005	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.775