Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OLZ18253.1 | OLZ18522.1 | BFX07_07745 | BFX07_07755 | Stage II sporulation protein R; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.885 |
| OLZ18253.1 | OLZ20286.1 | BFX07_07745 | BFX07_01560 | Stage II sporulation protein R; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Sporulation integral membrane protein YlbJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.792 |
| OLZ18253.1 | OLZ21404.1 | BFX07_07745 | BFX07_11145 | Stage II sporulation protein R; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.799 |
| OLZ18253.1 | OLZ21528.1 | BFX07_07745 | BFX07_11855 | Stage II sporulation protein R; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Stage III sporulation protein AD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.778 |
| OLZ18253.1 | OLZ21742.1 | BFX07_07745 | BFX07_13075 | Stage II sporulation protein R; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | YlmC/YmxH family sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.771 |
| OLZ18253.1 | OLZ21811.1 | BFX07_07745 | BFX07_11125 | Stage II sporulation protein R; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Spore gernimation protein GerA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.767 |
| OLZ18253.1 | OLZ21829.1 | BFX07_07745 | BFX07_11850 | Stage II sporulation protein R; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Stage III sporulation protein AE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.798 |
| OLZ18253.1 | OLZ22214.1 | BFX07_07745 | BFX07_10135 | Stage II sporulation protein R; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Spore protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.770 |
| OLZ18253.1 | OLZ22376.1 | BFX07_07745 | BFX07_09435 | Stage II sporulation protein R; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.845 |
| OLZ18253.1 | gpr | BFX07_07745 | BFX07_07285 | Stage II sporulation protein R; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | GPR endopeptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | 0.774 |
| OLZ18522.1 | OLZ18253.1 | BFX07_07755 | BFX07_07745 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage II sporulation protein R; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.885 |
| OLZ18522.1 | OLZ20286.1 | BFX07_07755 | BFX07_01560 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Sporulation integral membrane protein YlbJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.709 |
| OLZ18522.1 | OLZ21404.1 | BFX07_07755 | BFX07_11145 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.775 |
| OLZ18522.1 | OLZ21528.1 | BFX07_07755 | BFX07_11855 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage III sporulation protein AD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.763 |
| OLZ18522.1 | OLZ21742.1 | BFX07_07755 | BFX07_13075 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | YlmC/YmxH family sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.765 |
| OLZ18522.1 | OLZ21811.1 | BFX07_07755 | BFX07_11125 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Spore gernimation protein GerA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.774 |
| OLZ18522.1 | OLZ21829.1 | BFX07_07755 | BFX07_11850 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage III sporulation protein AE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.760 |
| OLZ18522.1 | OLZ22214.1 | BFX07_07755 | BFX07_10135 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Spore protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.772 |
| OLZ18522.1 | OLZ22376.1 | BFX07_07755 | BFX07_09435 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.778 |
| OLZ18522.1 | gpr | BFX07_07755 | BFX07_07285 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | GPR endopeptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | 0.774 |
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