STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARJ28445.1CRISPR-associated protein Csm6; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)    
Predicted Functional Partners:
ARJ28443.1
Type III-A CRISPR-associated RAMP protein Csm5; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.881
ARJ28442.1
Type III-A CRISPR-associated RAMP protein Csm4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.876
ARJ28441.1
Type III-A CRISPR-associated RAMP protein Csm3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.853
ARJ28440.1
Type III-A CRISPR-associated protein Csm2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.840
ARJ28446.1
CRISPR-associated endoribonuclease Cas6; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.815
ARJ28439.1
Type III-A CRISPR-associated protein Cas10/Csm1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.801
ARJ28444.1
Type III-A CRISPR-associated protein Csm6; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ARJ28438.1
CRISPR-associated endonuclease Cas2; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.732
ARJ28437.1
Subtype II CRISPR-associated endonuclease Cas1; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.704
Your Current Organism:
Staphylococcus lugdunensis
NCBI taxonomy Id: 28035
Other names: ATCC 43809, CCUG 25348, CIP 103642, DSM 4804, LMG 13346, LMG:13346, NCTC 12217, NRRL B-14774, S. lugdunensis, strain N860297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.