STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARJ28475.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (486 aa)    
Predicted Functional Partners:
ARJ28474.1
ECF transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.977
ARJ28473.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.949
ARJ30238.1
ECF transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.902
ARJ30239.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.783
ecfT
Transporter; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
 0.695
ARJ30069.1
Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.654
ARJ30849.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.484
ARJ28599.1
Thiamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.483
ARJ30888.1
Protein rlx; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.483
ARJ30067.1
Thiamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.467
Your Current Organism:
Staphylococcus lugdunensis
NCBI taxonomy Id: 28035
Other names: ATCC 43809, CCUG 25348, CIP 103642, DSM 4804, LMG 13346, LMG:13346, NCTC 12217, NRRL B-14774, S. lugdunensis, strain N860297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.