STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARJ30210.1TVP38/TMEM64 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (191 aa)    
Predicted Functional Partners:
lepB
S26 family signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.
  
  
 0.882
ARJ30208.1
Signal peptidase I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.
  
  
 0.806
ARJ29790.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.688
ARJ30204.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.677
addB
Helicase-exonuclease AddAB subunit AddB; ATP-dependent DNA helicase; Belongs to the helicase family. AddB/RexB type 1 subfamily.
 
     0.652
ARJ30591.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.623
addA
Helicase-exonuclease AddAB subunit AddA; ATP-dependent DNA helicase.
 
     0.610
ARJ30157.1
Competence protein ComK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.608
ARJ30025.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.566
ARJ29436.1
Signal transduction protein TRAP; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.549
Your Current Organism:
Staphylococcus lugdunensis
NCBI taxonomy Id: 28035
Other names: ATCC 43809, CCUG 25348, CIP 103642, DSM 4804, LMG 13346, LMG:13346, NCTC 12217, NRRL B-14774, S. lugdunensis, strain N860297
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.