STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARJ30743.1Lysozyme; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)    
Predicted Functional Partners:
ARJ28786.1
Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.741
B6N84_02630
Phosphohydrolase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.703
ARJ28585.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.701
ARJ30476.1
CDP-glycerol--poly(glycerophosphate) glycerophosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.693
ARJ30470.1
CDP-glycerol:glycerophosphate glycerophosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.644
ARJ30744.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.610
ARJ30425.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.600
ARJ30880.1
Teichoic acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.592
ARJ30800.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.591
tagH
Teichoic acid export protein ATP-binding subunit; Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system.
 
     0.584
Your Current Organism:
Staphylococcus lugdunensis
NCBI taxonomy Id: 28035
Other names: ATCC 43809, CCUG 25348, CIP 103642, DSM 4804, LMG 13346, LMG:13346, NCTC 12217, NRRL B-14774, S. lugdunensis, strain N860297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.