Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANY12835.1 | ANY12878.1 | BCY75_01700 | BCY75_01970 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.471 |
ANY12877.1 | ANY12878.1 | BCY75_01965 | BCY75_01970 | Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BCCT transporter (TC 2.A.15) family. | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.561 |
ANY12877.1 | BCY75_01960 | BCY75_01965 | BCY75_01960 | Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BCCT transporter (TC 2.A.15) family. | L-glyceraldehyde 3-phosphate reductase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.701 |
ANY12878.1 | ANY12835.1 | BCY75_01970 | BCY75_01700 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.471 |
ANY12878.1 | ANY12877.1 | BCY75_01970 | BCY75_01965 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BCCT transporter (TC 2.A.15) family. | 0.561 |
ANY12878.1 | ANY13101.1 | BCY75_01970 | BCY75_03390 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phenolic acid decarboxylase padC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.907 |
ANY12878.1 | BCY75_01960 | BCY75_01970 | BCY75_01960 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | L-glyceraldehyde 3-phosphate reductase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.529 |
ANY12878.1 | BCY75_01980 | BCY75_01970 | BCY75_01980 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S14; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.500 |
ANY13101.1 | ANY12878.1 | BCY75_03390 | BCY75_01970 | Phenolic acid decarboxylase padC; Derived by automated computational analysis using gene prediction method: Protein Homology. | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.907 |
BCY75_01960 | ANY12877.1 | BCY75_01960 | BCY75_01965 | L-glyceraldehyde 3-phosphate reductase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BCCT transporter (TC 2.A.15) family. | 0.701 |
BCY75_01960 | ANY12878.1 | BCY75_01960 | BCY75_01970 | L-glyceraldehyde 3-phosphate reductase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.529 |
BCY75_01980 | ANY12878.1 | BCY75_01980 | BCY75_01970 | 30S ribosomal protein S14; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.500 |