STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCY75_03480PTS cellobiose transporter subunit IIC; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 1 family. (476 aa)    
Predicted Functional Partners:
ANY13681.1
Mannose-6-phosphate isomerase, class I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannose-6-phosphate isomerase type 1 family.
 
  
 0.773
ANY13800.1
PTS beta-glucoside transporter subunit IIABC; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.679
ANY13637.1
PTS beta-glucoside transporter subunit EIIBCA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.626
ANY12806.1
PTS beta-glucoside transporter subunit EIIBCA; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.592
ANY14033.1
Tagatose 1,6-diphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.515
ANY12655.1
PTS N-acetylglucosamine transporter subunit IIABC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.508
ANY13952.1
1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
  
 0.499
celA
PTS sugar transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.495
ANY13567.1
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.430
ANY13114.1
Sodium:dicarboxylate symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.429
Your Current Organism:
Lactobacillus curvatus
NCBI taxonomy Id: 28038
Other names: ATCC 25601, Bacterium curvatum, CCUG 30669, CIP 102992, DSM 20019, IFO 15884, L. curvatus, LMG 13553, LMG 9198, LMG:13553, LMG:9198, Lactobacillus curvatus subsp. curvatus, Lactobacillus sp. N55, Lactobacillus sp. N61, NBRC 15884, NRRL B-4562
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