STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANY13122.1Coenzyme PQQ biosynthesis protein PqqD, pqqD; Derived by automated computational analysis using gene prediction method: Protein Homology. (117 aa)    
Predicted Functional Partners:
ANY13121.1
Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.953
sdaAA
L-serine dehydratase, iron-sulfur-dependent subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family.
       0.693
sdaAB
L-serine dehydratase, iron-sulfur-dependent subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family.
       0.661
ANY13123.1
Peptidase C69; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.608
ANY13938.1
Glutamate/gamma-aminobutyrate family transporter YjeM; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.510
ANY12912.1
Glutamate/gamma-aminobutyrate family transporter YjeM; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.448
ANY12919.1
Proline reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.425
ANY14349.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.409
Your Current Organism:
Lactobacillus curvatus
NCBI taxonomy Id: 28038
Other names: ATCC 25601, Bacterium curvatum, CCUG 30669, CIP 102992, DSM 20019, IFO 15884, L. curvatus, LMG 13553, LMG 9198, LMG:13553, LMG:9198, Lactobacillus curvatus subsp. curvatus, Lactobacillus sp. N55, Lactobacillus sp. N61, NBRC 15884, NRRL B-4562
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.