STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GU90_01605Proteinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (518 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
  0.639
GU90_04635
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.576
GU90_02385
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.546
GU90_07545
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.538
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
   
  0.520
GU90_09055
Aerial mycelium formation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.516
GU90_17310
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.516
GU90_07740
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.493
GU90_03265
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.485
GU90_05470
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.461
Your Current Organism:
Saccharopolyspora rectivirgula
NCBI taxonomy Id: 28042
Other names: ATCC 33515, DSM 43747, Faenia rectivirgula, IFO 12464, INMI 683, JCM 3057, Micropolyspora faeni, Micropolyspora rectivirgula, NBRC 12464, NRRL B-16280, S. rectivirgula, Thermopolyspora polyspora, Thermopolyspora rectivirgula, VKM Ac-810
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.