STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GU90_04635Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)    
Predicted Functional Partners:
GU90_09710
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.753
GU90_01730
dUTPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.752
GU90_01640
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.750
GU90_17360
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.731
GU90_11890
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.700
GU90_01755
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.638
GU90_17130
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.630
GU90_15565
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.619
rbpA-2
Membrane protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.
  
     0.614
whiA
Sporulation protein; Involved in cell division and chromosome segregation.
  
     0.606
Your Current Organism:
Saccharopolyspora rectivirgula
NCBI taxonomy Id: 28042
Other names: ATCC 33515, DSM 43747, Faenia rectivirgula, IFO 12464, INMI 683, JCM 3057, Micropolyspora faeni, Micropolyspora rectivirgula, NBRC 12464, NRRL B-16280, S. rectivirgula, Thermopolyspora polyspora, Thermopolyspora rectivirgula, VKM Ac-810
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.