Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GU90_13680Phenolic acid decarboxylase; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. (474 aa)    
Predicted Functional Partners:
GU90_13675
Hypothetical protein; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for phenolic acid decarboxylase.
 
 0.998
GU90_13685
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.947
GU90_13690
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.709
GU90_12910
2-pyrone-4,6-dicarboxylate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.649
GU90_10485
Salicylaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.611
GU90_10490
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.611
GU90_13670
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.599
GU90_07100
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.535
menG
Ubiquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
 
 
  
 0.522
GU90_17025
Extradiol ring-cleavage dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.489
Your Current Organism:
Saccharopolyspora rectivirgula
NCBI taxonomy Id: 28042
Other names: ATCC 33515, DSM 43747, Faenia rectivirgula, IFO 12464, INMI 683, JCM 3057, Micropolyspora faeni, Micropolyspora rectivirgula, NBRC 12464, NRRL B-16280, S. rectivirgula, Thermopolyspora polyspora, Thermopolyspora rectivirgula, VKM Ac-810
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