Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GU90_11550 | GU90_17335 | GU90_11550 | GU90_17335 | Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.717 |
GU90_15050 | GU90_17335 | GU90_15050 | GU90_17335 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.717 |
GU90_17335 | GU90_11550 | GU90_17335 | GU90_11550 | Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.717 |
GU90_17335 | GU90_15050 | GU90_17335 | GU90_15050 | Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.717 |
GU90_17335 | GU90_18380 | GU90_17335 | GU90_18380 | Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.717 |
GU90_17335 | nadE | GU90_17335 | GU90_04330 | Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.525 |
GU90_17335 | truB | GU90_17335 | GU90_09390 | Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.414 |
GU90_18380 | GU90_17335 | GU90_18380 | GU90_17335 | Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.717 |
nadE | GU90_17335 | GU90_04330 | GU90_17335 | NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.525 |
truB | GU90_17335 | GU90_09390 | GU90_17335 | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.414 |