GU90_17895 protein (Saccharopolyspora rectivirgula)

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[Homology]

Score

GU90_17895

ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (681 aa)

Predicted Functional Partners:

rpoB

0.818

rpoC

0.806

rpoZ

0.801

rpoA

0.769

rbpA-2

0.727

GU90_16335

0.687

sigA

0.686

GU90_02695

0.686

GU90_11285

0.686

GU90_16280

0.599

Your Current Organism:

Saccharopolyspora rectivirgula

NCBI taxonomy Id: 28042
Other names: ATCC 33515, DSM 43747, Faenia rectivirgula, IFO 12464, INMI 683, JCM 3057, Micropolyspora faeni, Micropolyspora rectivirgula, NBRC 12464, NRRL B-16280, S. rectivirgula, Thermopolyspora polyspora, Thermopolyspora rectivirgula, VKM Ac-810

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GU90_02695	GU90_17895	GU90_02695	GU90_17895	RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.686
GU90_02695	rbpA-2	GU90_02695	GU90_06805	RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Membrane protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.	0.857
GU90_02695	rpoA	GU90_02695	GU90_05240	RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.912
GU90_02695	rpoB	GU90_02695	GU90_05460	RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.927
GU90_02695	rpoC	GU90_02695	GU90_05455	RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.895
GU90_02695	rpoZ	GU90_02695	GU90_07850	RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.858
GU90_11285	GU90_17895	GU90_11285	GU90_17895	RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.686
GU90_11285	rbpA-2	GU90_11285	GU90_06805	RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Membrane protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.	0.857
GU90_11285	rpoA	GU90_11285	GU90_05240	RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.921
GU90_11285	rpoB	GU90_11285	GU90_05460	RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.930
GU90_11285	rpoC	GU90_11285	GU90_05455	RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.899
GU90_11285	rpoZ	GU90_11285	GU90_07850	RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.858
GU90_16280	GU90_16335	GU90_16280	GU90_16335	ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily.	ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
GU90_16280	GU90_17895	GU90_16280	GU90_17895	ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily.	ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.599
GU90_16280	rpoB	GU90_16280	GU90_05460	ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.591
GU90_16335	GU90_16280	GU90_16335	GU90_16280	ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily.	0.993
GU90_16335	GU90_17895	GU90_16335	GU90_17895	ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.687
GU90_16335	rpoA	GU90_16335	GU90_05240	ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.798
GU90_16335	rpoB	GU90_16335	GU90_05460	ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.908
GU90_16335	rpoC	GU90_16335	GU90_05455	ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.663

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