STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eccBType VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology. (521 aa)    
Predicted Functional Partners:
ORV19512.1
Secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.968
eccA
Type VII secretion AAA-ATPase EccA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.938
eccD
Peptidase S8; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 
 0.921
mycP-2
Type VII secretion-associated serine protease mycosin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.897
ORV09183.1
Type VII secretion integral membrane protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.858
mycP-3
Type VII secretion-associated serine protease mycosin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.841
eccE
Type VII secretion protein EccE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.834
eccE-2
Type VII secretion protein EccE; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.826
mycP
Type VII secretion-associated serine protease mycosin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
 
 0.823
AWB95_00970
Type VII secretion protein EsxS; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.801
Your Current Organism:
Mycobacterium celatum
NCBI taxonomy Id: 28045
Other names: ATCC 51131, CCUG 39185, CDC 90-0899, CIP 106109, DSM 44243, JCM 12373, M. celatum, NCTC 13729
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.