STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV19564.1Cholesterol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (568 aa)    
Predicted Functional Partners:
ORV19568.1
Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
    
 0.893
ORV19567.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.890
gabD2
NADP-dependent semialdehyde dehydrogenase; part of alternative pathway from alpha-ketoglutarate to succinate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.858
ORV18145.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.822
ORV12665.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.818
ORV19566.1
Vanillate O-demethylase oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.792
ORV09645.1
Steroid delta-isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.773
ORV17920.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.726
ORV11330.1
Sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.726
ORV07030.1
Secretion protein EccK; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.726
Your Current Organism:
Mycobacterium celatum
NCBI taxonomy Id: 28045
Other names: ATCC 51131, CCUG 39185, CDC 90-0899, CIP 106109, DSM 44243, JCM 12373, M. celatum, NCTC 13729
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.