STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV19176.1Toxin-antitoxin system; Derived by automated computational analysis using gene prediction method: Protein Homology. (82 aa)    
Predicted Functional Partners:
vapC-2
Twitching motility protein PilT; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
 
 
 0.969
ORV18458.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.705
ORV08436.1
Tellurium resistance protein TerC; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.613
xerD
Recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
      
 0.613
ORV14868.1
Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.580
ORV07034.1
Type VII secretion integral membrane protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.573
vapC-10
Twitching motility protein PilT; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
 
 
 0.566
vapC-20
Ribonuclease; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
 
 
 0.566
ORV16481.1
PIN domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.559
ORV19177.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.519
Your Current Organism:
Mycobacterium celatum
NCBI taxonomy Id: 28045
Other names: ATCC 51131, CCUG 39185, CDC 90-0899, CIP 106109, DSM 44243, JCM 12373, M. celatum, NCTC 13729
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.