Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
ORV18398.1C-5 sterol desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)    
Predicted Functional Partners:
ORV18155.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.765
AWB95_02580
Hypothetical protein; Incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.671
ORV10681.1
Electron transfer flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.652
ORV08424.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.636
ORV18400.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.605
ORV19591.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.563
ORV08389.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.563
rpsS
30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
    
   0.551
purD
Phosphoribosylamine--glycine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GARS family.
    
   0.495
ORV17988.1
Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.487
Your Current Organism:
Mycobacterium celatum
NCBI taxonomy Id: 28045
Other names: ATCC 51131, CCUG 39185, CDC 90-0899, CIP 106109, DSM 44243, JCM 12373, M. celatum, NCTC 13729
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