STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV18580.1Toxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)    
Predicted Functional Partners:
ORV14759.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.794
ORV13933.1
mRNA interferase MazF3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.759
ORV18562.1
Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.663
ORV18561.1
Antitoxin RelB; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
   
 0.603
ORV09659.1
Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.587
ORV14918.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.497
vapC-23
Ribonuclease; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.489
vapC-4
Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
   
 0.477
ORV09673.1
Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
   
 0.466
ORV18517.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.460
Your Current Organism:
Mycobacterium celatum
NCBI taxonomy Id: 28045
Other names: ATCC 51131, CCUG 39185, CDC 90-0899, CIP 106109, DSM 44243, JCM 12373, M. celatum, NCTC 13729
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.