STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORV18543.1Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the type-B carboxylesterase/lipase family. (501 aa)    
Predicted Functional Partners:
ORV18542.1
Gluconate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.859
ORV18587.1
Phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.859
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.774
ORV18544.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.645
ORV18546.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.624
ORV09323.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.602
thiD
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.568
ORV16494.1
DNA repair exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.542
ORV16495.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.522
ORV10004.1
Recombinase RecF; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.522
Your Current Organism:
Mycobacterium celatum
NCBI taxonomy Id: 28045
Other names: ATCC 51131, CCUG 39185, CDC 90-0899, CIP 106109, DSM 44243, JCM 12373, M. celatum, NCTC 13729
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