ORV18261.1 protein (Mycobacterium celatum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Mycobacterium celatum

NCBI taxonomy Id: 28045
Other names: ATCC 51131, CCUG 39185, CDC 90-0899, CIP 106109, DSM 44243, JCM 12373, M. celatum, NCTC 13729

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ORV10900.1	ORV10902.1	AWB95_13845	AWB95_13855	Molybdenum cofactor biosynthesis protein MoaE; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdopterin synthase sulfur carrier subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ORV10900.1	ORV16599.1	AWB95_13845	AWB95_06180	Molybdenum cofactor biosynthesis protein MoaE; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdopterin synthase sulfur carrier subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
ORV10900.1	ORV18162.1	AWB95_13845	AWB95_05105	Molybdenum cofactor biosynthesis protein MoaE; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.735
ORV10900.1	ORV18261.1	AWB95_13845	AWB95_04075	Molybdenum cofactor biosynthesis protein MoaE; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cyclodehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.838
ORV10900.1	thiS	AWB95_13845	AWB95_18540	Molybdenum cofactor biosynthesis protein MoaE; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thiamine biosynthesis protein ThiS; With ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.488
ORV10902.1	ORV10900.1	AWB95_13855	AWB95_13845	Molybdopterin synthase sulfur carrier subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdenum cofactor biosynthesis protein MoaE; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ORV10902.1	ORV16598.1	AWB95_13855	AWB95_06175	Molybdopterin synthase sulfur carrier subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.495
ORV10902.1	ORV16599.1	AWB95_13855	AWB95_06180	Molybdopterin synthase sulfur carrier subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdopterin synthase sulfur carrier subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.838
ORV10902.1	ORV18162.1	AWB95_13855	AWB95_05105	Molybdopterin synthase sulfur carrier subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.638
ORV10902.1	ORV18261.1	AWB95_13855	AWB95_04075	Molybdopterin synthase sulfur carrier subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cyclodehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.749
ORV10902.1	thiS	AWB95_13855	AWB95_18540	Molybdopterin synthase sulfur carrier subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thiamine biosynthesis protein ThiS; With ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.419
ORV14688.1	ORV18261.1	AWB95_08655	AWB95_04075	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cyclodehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.656
ORV16598.1	ORV10902.1	AWB95_06175	AWB95_13855	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdopterin synthase sulfur carrier subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.495
ORV16598.1	ORV16599.1	AWB95_06175	AWB95_06180	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdopterin synthase sulfur carrier subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
ORV16598.1	ORV18145.1	AWB95_06175	AWB95_04980	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.572
ORV16598.1	ORV18261.1	AWB95_06175	AWB95_04075	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cyclodehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.725
ORV16598.1	thiS	AWB95_06175	AWB95_18540	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thiamine biosynthesis protein ThiS; With ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778
ORV16599.1	ORV10900.1	AWB95_06180	AWB95_13845	Molybdopterin synthase sulfur carrier subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdenum cofactor biosynthesis protein MoaE; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
ORV16599.1	ORV10902.1	AWB95_06180	AWB95_13855	Molybdopterin synthase sulfur carrier subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdopterin synthase sulfur carrier subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.838
ORV16599.1	ORV16598.1	AWB95_06180	AWB95_06175	Molybdopterin synthase sulfur carrier subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992