ORV14820.1 protein (Mycobacterium celatum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Mycobacterium celatum

NCBI taxonomy Id: 28045
Other names: ATCC 51131, CCUG 39185, CDC 90-0899, CIP 106109, DSM 44243, JCM 12373, M. celatum, NCTC 13729

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ORV08307.1	ORV14640.1	AWB95_19545	AWB95_08380	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.	0.595
ORV08307.1	ORV14820.1	AWB95_19545	AWB95_09415	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	PaaX domain-containing protein, C- domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.772
ORV08307.1	ORV15307.1	AWB95_19545	AWB95_07395	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.602
ORV14640.1	ORV08307.1	AWB95_08380	AWB95_19545	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.595
ORV14640.1	ORV14806.1	AWB95_08380	AWB95_09330	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.	Mycofactocin system transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.659
ORV14640.1	ORV14820.1	AWB95_08380	AWB95_09415	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.	PaaX domain-containing protein, C- domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.665
ORV14640.1	ORV15307.1	AWB95_08380	AWB95_07395	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.	HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.775
ORV14640.1	ORV19520.1	AWB95_08380	AWB95_01030	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.623
ORV14640.1	cobB-3	AWB95_08380	AWB95_22290	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.	NAD-dependent deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sirtuin family. Class III subfamily.	0.589
ORV14806.1	ORV14640.1	AWB95_09330	AWB95_08380	Mycofactocin system transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.	0.659
ORV14806.1	ORV14820.1	AWB95_09330	AWB95_09415	Mycofactocin system transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	PaaX domain-containing protein, C- domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.725
ORV14806.1	ORV15307.1	AWB95_09330	AWB95_07395	Mycofactocin system transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.615
ORV14806.1	ORV19520.1	AWB95_09330	AWB95_01030	Mycofactocin system transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.693
ORV14806.1	cobB-3	AWB95_09330	AWB95_22290	Mycofactocin system transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD-dependent deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sirtuin family. Class III subfamily.	0.809
ORV14819.1	ORV14820.1	AWB95_09410	AWB95_09415	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.	PaaX domain-containing protein, C- domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.862
ORV14819.1	ORV14821.1	AWB95_09410	AWB95_09420	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.	enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
ORV14819.1	ORV14822.1	AWB95_09410	AWB95_09425	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.	DNA alkylation response protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.839
ORV14819.1	ORV14824.1	AWB95_09410	AWB95_09435	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.679
ORV14820.1	ORV08307.1	AWB95_09415	AWB95_19545	PaaX domain-containing protein, C- domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.772
ORV14820.1	ORV14640.1	AWB95_09415	AWB95_08380	PaaX domain-containing protein, C- domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.	0.665