ORV14853.1 protein (Mycobacterium celatum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Mycobacterium celatum

NCBI taxonomy Id: 28045
Other names: ATCC 51131, CCUG 39185, CDC 90-0899, CIP 106109, DSM 44243, JCM 12373, M. celatum, NCTC 13729

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ORV08072.1	ORV10966.1	AWB95_20360	AWB95_14245	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.952
ORV08072.1	ORV13619.1	AWB95_20360	AWB95_11265	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyisobutyryl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.723
ORV08072.1	ORV13904.1	AWB95_20360	AWB95_09885	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ORV08072.1	ORV14130.1	AWB95_20360	AWB95_10375	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ORV08072.1	ORV14851.1	AWB95_20360	AWB95_09610	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.480
ORV08072.1	ORV14853.1	AWB95_20360	AWB95_09620	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.723
ORV08072.1	ORV16708.1	AWB95_20360	AWB95_06255	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.979
ORV08072.1	ORV18546.1	AWB95_20360	AWB95_03480	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ORV08072.1	sucC	AWB95_20360	AWB95_14335	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	succinate--CoA ligase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.	0.779
ORV10966.1	ORV08072.1	AWB95_14245	AWB95_20360	Chemotaxis protein CheB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.952
ORV10966.1	ORV13619.1	AWB95_14245	AWB95_11265	Chemotaxis protein CheB; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyisobutyryl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.872
ORV10966.1	ORV13904.1	AWB95_14245	AWB95_09885	Chemotaxis protein CheB; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.696
ORV10966.1	ORV14130.1	AWB95_14245	AWB95_10375	Chemotaxis protein CheB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.952
ORV10966.1	ORV14853.1	AWB95_14245	AWB95_09620	Chemotaxis protein CheB; Derived by automated computational analysis using gene prediction method: Protein Homology.	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.872
ORV10966.1	ORV16708.1	AWB95_14245	AWB95_06255	Chemotaxis protein CheB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.652
ORV10966.1	ORV18546.1	AWB95_14245	AWB95_03480	Chemotaxis protein CheB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.921
ORV10966.1	sucC	AWB95_14245	AWB95_14335	Chemotaxis protein CheB; Derived by automated computational analysis using gene prediction method: Protein Homology.	succinate--CoA ligase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.	0.593
ORV13619.1	ORV08072.1	AWB95_11265	AWB95_20360	3-hydroxyisobutyryl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.723
ORV13619.1	ORV10966.1	AWB95_11265	AWB95_14245	3-hydroxyisobutyryl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.872
ORV13619.1	ORV13904.1	AWB95_11265	AWB95_09885	3-hydroxyisobutyryl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741