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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV12706.1Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (164 aa)    
Predicted Functional Partners:
ORV12705.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.895
ORV19699.1
Phosphotyrosine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.869
ORV12707.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.862
ORV12701.1
Acid phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.771
ORV12702.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.767
ORV12703.1
Nif3-like dinuclear metal center hexameric protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
  
    0.767
ORV12704.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.766
ndk
Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
   
  
 0.680
ORV18147.1
Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the DNA photolyase family.
  
 
   0.675
ORV14887.1
Acid phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.636
Your Current Organism:
Mycobacterium celatum
NCBI taxonomy Id: 28045
Other names: ATCC 51131, CCUG 39185, CDC 90-0899, CIP 106109, DSM 44243, JCM 12373, M. celatum, NCTC 13729
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