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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV09958.1XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)    
Predicted Functional Partners:
ORV09957.1
Heparin-binding hemagglutinin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.778
ORV12658.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.759
ORV10881.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.748
ORV10883.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.716
ORV10026.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.707
ORV09956.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.699
deoC
2-deoxyribose-5-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
  
    0.655
ORV09901.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.652
ORV09946.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.652
ORV09959.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.640
Your Current Organism:
Mycobacterium celatum
NCBI taxonomy Id: 28045
Other names: ATCC 51131, CCUG 39185, CDC 90-0899, CIP 106109, DSM 44243, JCM 12373, M. celatum, NCTC 13729
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