ORV07815.1 protein (Mycobacterium celatum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ORV07815.1

Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. (296 aa)

Predicted Functional Partners:

ORV07816.1

0.803

ORV07817.1

0.799

ORV19579.1

0.769

ORV18478.1

0.769

ORV09822.1

0.768

ORV14862.1

0.763

ORV19087.1

0.572

ORV14687.1

0.499

ORV08319.1

0.458

ORV18111.1

0.425

Your Current Organism:

Mycobacterium celatum

NCBI taxonomy Id: 28045
Other names: ATCC 51131, CCUG 39185, CDC 90-0899, CIP 106109, DSM 44243, JCM 12373, M. celatum, NCTC 13729

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ORV07815.1	ORV07816.1	AWB95_20535	AWB95_20540	Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	3-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.803
ORV07815.1	ORV07817.1	AWB95_20535	AWB95_20545	Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.799
ORV07815.1	ORV08319.1	AWB95_20535	AWB95_19620	Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.458
ORV07815.1	ORV09822.1	AWB95_20535	AWB95_16425	Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	SAM-dependent methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	0.768
ORV07815.1	ORV14687.1	AWB95_20535	AWB95_08645	Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.499
ORV07815.1	ORV14862.1	AWB95_20535	AWB95_09665	Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	SAM-dependent methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	0.763
ORV07815.1	ORV18111.1	AWB95_20535	AWB95_04730	Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.425
ORV07815.1	ORV18478.1	AWB95_20535	AWB95_03055	Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	SAM-dependent methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	0.769
ORV07815.1	ORV19087.1	AWB95_20535	AWB95_02160	Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	0.572
ORV07815.1	ORV19579.1	AWB95_20535	AWB95_01000	Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	SAM-dependent methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	0.769
ORV07816.1	ORV07815.1	AWB95_20540	AWB95_20535	3-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	0.803
ORV07816.1	ORV07817.1	AWB95_20540	AWB95_20545	3-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.862
ORV07817.1	ORV07815.1	AWB95_20545	AWB95_20535	Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	0.799
ORV07817.1	ORV07816.1	AWB95_20545	AWB95_20540	Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.862
ORV08319.1	ORV07815.1	AWB95_19620	AWB95_20535	SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	0.458
ORV09822.1	ORV07815.1	AWB95_16425	AWB95_20535	SAM-dependent methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	0.768
ORV09822.1	ORV19087.1	AWB95_16425	AWB95_02160	SAM-dependent methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	0.749
ORV14687.1	ORV07815.1	AWB95_08645	AWB95_20535	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	0.499
ORV14687.1	ORV18111.1	AWB95_08645	AWB95_04730	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.618
ORV14862.1	ORV07815.1	AWB95_09665	AWB95_20535	SAM-dependent methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.	0.763