Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ORV07034.1Type VII secretion integral membrane protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology. (473 aa)    
Predicted Functional Partners:
ORV06999.1
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.899
eccA-4
Type VII secretion AAA-ATPase EccA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.896
ORV06994.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.871
eccB-5
Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.858
eccB-2
Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.798
AWB95_05775
PE family protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.784
eccE-3
Type VII secretion protein EccE; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.775
ORV07896.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.705
ORV06998.1
Secretion protein EspG; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.687
ORV14113.1
Secreted hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.674
Your Current Organism:
Mycobacterium celatum
NCBI taxonomy Id: 28045
Other names: ATCC 51131, CCUG 39185, CDC 90-0899, CIP 106109, DSM 44243, JCM 12373, M. celatum, NCTC 13729
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